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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918855.1_cds_XP_016468206.1_60871
CDS Infomation

[gene=LOC107790756] [db_xref=GeneID:107790756] [protein=probable 2-oxoglutarate-dependent dioxygenase AOP1.2 isoform X2] [protein_id=XP_016468206.1] [location=join(27734..28107,29030..29396)] [gbkey=CDS]
Sequence

ATGGCTTCCAAAAATATGTCCAATATTCCTAGTATATATCTTGCTGAAGAAAATCTAAAA
CCAGCAACAAGTTCTTGGATTGCAGCATGCCAAGAAGTTAGACAAGCATTCGAGTCGTAT
GGTTGTTTCGTGGCAATATATGATAAAATTTCTAAAGAGCTAAGCAACTCAATTTTCCAA
ATATTGCCAGAGTTGTTTGATCTCCCCAGTAAAATCAAAAGCCAAAATATTTCTGATATA
CCCTATTTTGGTTACCTACCACCAAATAGGTCAAGGCCTCTCTATGAAAGCATGGGAATT
GAGGACGCAACAAATCTACAAGTTGTTCAAGGTTTCACTAATCTCATGTGGCCCTCAGGA
AATCAGCATTTCTGGATGGTATTTGAAAGCTATGGTGTGAACAAGTGCTACGATTTTTAC
GCTGAATCTAACACTTTGTTCCTCCATAGAGTGAACAAATATAGAGTGCCGAGATTGGAC
GAGTCTACAGTTGGTGTTTCAGATCATACAGACCTTGACTTCATCACTATACTTCACCAA
AATCATGTTGATGGTTTAGAGGTCAAAACCAAGGATGGAAATTGGATCTCTGTTCAGTTT
CCCCCTTCTTCTTTTGTTATCATGGCTGGTGAAGGACTTAGGGTCAATTCCTTTTCCTCT
CTTTTTAATTTCTTTTTTATTTTTCTACTGTTTTCTGAGAATGGGCGCATTGGCGTAACT
GGTAAAGTTGTTGCCATGTGA

Peptide Sequence

PEP ID

XP_016468206.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1.2 isoform X2 [Nicotiana tabacum]
Sequence

MASKNMSNIPSIYLAEENLKPATSSWIAACQEVRQAFESYGCFVAIYDKISKELSNSIFQ
ILPELFDLPSKIKSQNISDIPYFGYLPPNRSRPLYESMGIEDATNLQVVQGFTNLMWPSG
NQHFWMVFESYGVNKCYDFYAESNTLFLHRVNKYRVPRLDESTVGVSDHTDLDFITILHQ
NHVDGLEVKTKDGNWISVQFPPSSFVIMAGEGLRVNSFSSLFNFFFIFLLFSENGRIGVT
GKVVAM

Transcript Sequence

Gene sequence data has not been registered.